| # | Tim | Gol |
| 1 | Luton Town | 22(4) |
| 2 | Doncaster | 17(1) |
| 3 | Stockport County | 16 |
| 4 | AFC Wimbledon | 16(1) |
| 5 | Huddersfield Town | 15(1) |
| 6 | Northampton Town | 15(2) |
| 7 | Port Vale | 15 |
| 8 | Rotherham | 14(1) |
| 9 | Plymouth | 14 |
| 10 | Stevenage | 13 |
| 11 | Fleetwood Town | 13 |
| 12 | Crewe Alexandra | 13(2) |
| 13 | Bolton | 13 |
| 14 | Swindon Town | 12(1) |
| 15 | West Ham U21 | 12 |
| 16 | Bristol Rovers | 11(1) |
| 17 | Salford City | 11(1) |
| 18 | Harrogate Town | 10(1) |
| 19 | Blackpool | 10 |
| 20 | Cambridge United | 8(1) |
| 21 | Lincoln City | 8 |
| 22 | Tottenham U21 | 8 |
| 23 | Bradford | 8 |
| 24 | Peterborough | 7 |
| 25 | Walsall | 7 |
| 26 | Wycombe | 7 |
| 27 | Wolves U21 | 7(1) |
| 28 | Manchester City U21 | 7 |
| 29 | Crawley Town | 6 |
| 30 | Leyton Orient | 6 |
| 31 | Tranmere | 6 |
| 32 | Colchester United | 6(1) |
| 33 | Barnsley | 6(1) |
| 34 | Reading | 6(1) |
| 35 | Arsenal Reserves | 6(1) |
| 36 | Grimsby | 6(1) |
| 37 | Crystal Palace U21 | 6(1) |
| 38 | Newcastle United U21 | 5 |
| 39 | Everton U21 | 5 |
| 40 | Cardiff City | 5 |
| 41 | Gillingham | 5 |
| 42 | Bromley | 5 |
| 43 | Chesterfield | 5 |
| 44 | Accrington Stanley | 5 |
| 45 | Exeter City | 5 |
| 46 | Barnet | 5 |
| 47 | Shrewsbury Town | 5 |
| 48 | Oldham Athletic | 5(1) |
| 49 | Manchester United U21 | 4 |
| 50 | Aston Villa U-21 | 4(1) |
| 51 | Nottingham Forest U21 | 3 |
| 52 | Leeds U21 | 3 |
| 53 | Mansfield Town | 3 |
| 54 | Burton | 3 |
| 55 | Barrow | 3 |
| 56 | Cheltenham | 2 |
| 57 | Brighton U21 | 2 |
| 58 | Notts County | 2 |
| 59 | Liverpool U21 | 2 |
| 60 | Fulham U21 | 2 |
| 61 | Wigan | 2 |
| 62 | Newport County | 2 |
| 63 | Chelsea Reserves | 1 |
| 64 | MK Dons | 1(1) |