| # | Team | Penalty goals |
|---|---|---|
| 1 |  FC Rotor Volgograd | 3 |
| 2 |  FK Yenisey Krasnoyarsk | 2 |
| 3 |  Volga Olimpiets | 2 |
| 4 |  Torpedo Moscow | 1 |
| 5 |  FC Shinnik Yaroslavl | 1 |
| 6 |  FC Kamaz Naberezhnye Chelny | 1 |
| 7 |  FC Ural Yekaterinburg | 1 |
| 8 |  Spartak Kostroma | 1 |
| 9 |  Tekstilshchik Ivanovo | 1 |
| 10 |  FK Ufa | 1 |