| # | Team | Yellow cards |
|---|---|---|
| 1 |  FK Ufa | 85 |
| 2 |  Sokol Saratov | 82 |
| 3 |  FC Kamaz Naberezhnye Chelny | 81 |
| 4 |  FC Rotor Volgograd | 73 |
| 5 |  Spartak Kostroma | 73 |
| 6 |  Rodina Moskva | 68 |
| 7 |  Chernomorets Novorossijsk | 68 |
| 8 |  FK Yenisey Krasnoyarsk | 66 |
| 9 |  Volga Ulyanovsk | 65 |
| 10 |  Arsenal Tula | 64 |
| 11 |  FC Ural Yekaterinburg | 60 |
| 12 |  Fakel Voronezh | 59 |
| 13 |  FC Ska-Khabarovsk | 59 |
| 14 |  Chaika Peschanokopskoe | 58 |
| 15 |  Torpedo Moscow | 51 |
| 16 |  FK Chelyabinsk | 47 |
| 17 |  FC Shinnik Yaroslavl | 45 |
| 18 |  Neftekhimik | 42 |