| # | Team | Yellow cards |
|---|---|---|
| 1 |  FC Rotor Volgograd | 17 |
| 2 |  FK Yenisey Krasnoyarsk | 16 |
| 3 |  Neftekhimik | 15 |
| 4 |  Torpedo Moscow | 13 |
| 5 |  FC Kamaz Naberezhnye Chelny | 12 |
| 6 |  FC Ska-Khabarovsk | 10 |
| 7 |  Tekstilshchik Ivanovo | 10 |
| 8 |  Volga Ulyanovsk | 10 |
| 9 |  FK Ufa | 10 |
| 10 |  Volga Olimpiets | 9 |
| 11 |  FC Leningradets | 8 |
| 12 |  Veles | 8 |
| 13 |  PFC Sochi | 8 |
| 14 |  FC Ural Yekaterinburg | 7 |
| 15 |  Arsenal Tula | 6 |
| 16 |  FC Shinnik Yaroslavl | 6 |
| 17 |  FK Chelyabinsk | 5 |
| 18 |  Spartak Kostroma | 4 |