| 1 |  Stroitel Kamensk-Shakhtinsky | 22 |
| 2 |  SKA Rostov | 18 |
| 3 | Dynamo Vologda | 18 |
| 4 | Drots Moscow FC | 18 |
| 5 | Kristall MEZ Borisoglebsk | 18 |
| 6 |  FC 10 | 17 |
| 7 | Izberbash | 16 |
| 8 |  Sokol Saratov | 15 |
| 9 |  FC Spartak Moscow | 15 |
| 10 |  Amkar Perm | 14 |
| 11 |  Znamya Noginsk | 14 |
| 12 |  Khimik Dzerzhinsk | 14 |
| 13 |  Nosta | 14 |
| 14 |  CSKA Moscow | 14 |
| 15 | FK Ilpar | 13 |
| 16 |  Kaluga | 13 |
| 17 |  FK Makhachkala | 12 |
| 18 |  Spartak Nal'chik | 12 |
| 19 |  Dinamo Bryansk | 12 |
| 20 |  Dynamo Stavropol | 12 |
| 21 |  Ryazan | 12 |
| 22 |  FK Krasnodar | 11 |
| 23 |  Zenit | 11 |
| 24 |  FC Krylia Sovetov Samara | 11 |
| 25 |  Volgar Astrakhan | 11 |
| 26 | FK Kosmos Dolgoprudny | 10 |
| 27 |  Orel | 10 |
| 28 |  Salyut-Belgorod | 10 |
| 29 | FK Spartak Tambov | 10 |
| 30 | Metallurg Asha | 10 |
| 31 |  FC Dinamo Moscow | 10 |
| 32 |  Lokomotiv | 9 |
| 33 |  Republican FC Akhmat Grozny | 9 |
| 34 |  Akron | 9 |
| 35 |  Tosno | 9 |
| 36 | Kristall | 9 |
| 37 | Kirovets-Voskhozhdenie | 8 |
| 38 |  Sibir Novosibirsk | 8 |
| 39 | FK Pobeda Junior | 8 |
| 40 |  Luki-Energiya | 8 |
| 41 | FK Temp Barnaul | 8 |
| 42 |  Rodina Moskva | 8 |
| 43 | FC Tver | 8 |
| 44 |  FK Rostov | 8 |
| 45 | FC Iskra Smolensk | 7 |
| 46 | FK Shumbrat Saransk | 7 |
| 47 | Broke Boys | 7 |
| 48 | Dinamo St. Petersburg | 7 |
| 49 |  Alania Vladikavkaz | 6 |
| 50 |  Anzhi | 6 |
| 51 |  Dynamo Kirov | 6 |
| 52 |  Zenit Penza | 6 |
| 53 |  FC Rubin Kazan | 5 |
| 54 |  FC Avangard Kursk | 5 |
| 55 | Nart Cherkessk | 4 |
| 56 |  Fakel Voronezh | 4 |
| 57 |  FC Orenburg | 4 |
| 58 |  Bomik Tsivilsk | 4 |
| 59 | Zvezda St. Petersburg | 3 |
| 60 | Volna Kovernino | 2 |
| 61 | Kvant | 2 |
| 62 |  FC Baltika Kaliningrad | 2 |
| 63 |  Tyumen | 1 |
