| # | Team | Penalty goals |
|---|---|---|
| 1 |  Homeboyz | 3 |
| 2 |  Muranga Seal | 3 |
| 3 |  Tusker | 2 |
| 4 |  Mathare United | 2 |
| 5 |  Ulinzi Stars | 2 |
| 6 |  Shabana FC | 2 |
| 7 |  APS Bomet | 2 |
| 8 |  Gor Mahia | 1 |
| 9 |  Sofapaka | 1 |
| 10 |  KCB | 1 |
| 11 |  Bandari | 1 |
| 12 |  Bidco United | 1 |
| 13 |  Mara Sugar FC | 1 |
| 14 |  Nairobi United | 1 |