| # | Team | Penalty goals |
|---|---|---|
| 1 | Arminia Bielefeld | 9 |
| 2 | Paderborn | 7 |
| 3 | 1. FC Kaiserslautern | 6 |
| 4 | Schalke | 5 |
| 5 | Hannover | 5 |
| 6 | Hertha | 5 |
| 7 | 1. FC Magdeburg | 4 |
| 8 | Holstein Kiel | 4 |
| 9 | SV Elversberg | 4 |
| 10 | Karlsruher SC | 4 |
| 11 | SpVgg Greuther Fürth | 4 |
| 12 | 1. FC Nürnberg | 4 |
| 13 | Bochum | 4 |
| 14 | Eintracht Braunschweig | 3 |
| 15 | Preußen Münster | 2 |
| 16 | SV Darmstadt 98 | 2 |
| 17 | Dynamo Dresden | 1 |
| 18 | Dusseldorf | 1 |